Dr Roy Chaudhuri

School of Biosciences

Lecturer in Bioinformatics

r.chaudhuri@sheffield.ac.uk
+44 114 222 2837

Full contact details

Dr Roy Chaudhuri
School of Biosciences
Firth Court
Western Bank
91Ö±²¥
S10 2TN
Research interests

My research interests are primarily in the area of bacterial genomics.

Current research topics include:

  • Comparative genomics and phylogenetics of bacterial pathogens, particularly E. coli and Salmonella
  • Use of transposon insertion sequencing methods (TraDIS/TnSeq/HITS/InSeq) to identify essential bacterial genes and genes important for survival in particular environments such as during infection of a model system
  • Development of user-friendly software tools and online resources for exploring data from -omics technologies. Examples include coliBASE, Xbase and the recently-funded .
Publications

Show: Featured publications All publications

Journal articles

  • Grant AJ, Oshota O, Chaudhuri RR, Mayho M, Peters SE, Clare S, Maskell DJ & Mastroeni P (2016) . Infection and Immunity, 84(4), 989-997. RIS download Bibtex download
  • Weinert LA, Chaudhuri RR, Wang J, Peters SE, Corander J, Jombart T, Baig A, Howell KJ, Vehkala M, Välimäki N , Harris D et al (2015) . Nature Communications, 6(1). RIS download Bibtex download
  • Howell KJ, Weinert LA, Chaudhuri RR, Luan S-L, Peters SE, Corander J, Harris D, Angen Ø, Aragon V, Bensaid A , Williamson SM et al (2014) . BMC Genomics, 15(1), 1179-1179. RIS download Bibtex download
  • Luan S-L, Chaudhuri RR, Peters SE, Mayho M, Weinert LA, Crowther SA, Wang J, Langford PR, Rycroft A, Wren BW , Tucker AW et al (2013) . Vet Microbiol, 166(3-4), 558-566. RIS download Bibtex download
  • Howell KJ, Weinert LA, Luan S-L, Peters SE, Chaudhuri RR, Harris D, Angen O, Aragon V, Parkhill J, Langford PR , Rycroft AN et al (2013) . J Bacteriol, 195(18), 4264-4273. RIS download Bibtex download
  • Chaudhuri RR, Morgan E, Peters SE, Pleasance SJ, Hudson DL, Davies HM, Wang J, van Diemen PM, Buckley AM, Bowen AJ , Pullinger GD et al (2013) . PLoS Genet, 9(4), e1003456. RIS download Bibtex download
  • Chaudhuri RR & Henderson IR (2012) . Infect Genet Evol, 12(2), 214-226. RIS download Bibtex download
  • Chaudhuri RR, Yu L, Kanji A, Perkins TT, Gardner PP, Choudhary J, Maskell DJ & Grant AJ (2011) . Microbiology, 157(Pt 10), 2922-2932. RIS download Bibtex download
  • Eckert SE, Dziva F, Chaudhuri RR, Langridge GC, Turner DJ, Pickard DJ, Maskell DJ, Thomson NR & Stevens MP (2011) . Journal of Bacteriology, 193(7), 1771-1776. RIS download Bibtex download
  • Crossman LC, Chaudhuri RR, Beatson SA, Wells TJ, Desvaux M, Cunningham AF, Petty NK, Mahon V, Brinkley C, Hobman JL , Savarino SJ et al (2010) . J Bacteriol, 192(21), 5822-5831. RIS download Bibtex download
  • Chaudhuri RR, Sebaihia M, Hobman JL, Webber MA, Leyton DL, Goldberg MD, Cunningham AF, Scott-Tucker A, Ferguson PR, Thomas CM , Frankel G et al (2010) . PLoS One, 5(1), e8801. RIS download Bibtex download
  • Chaudhuri RR, Allen AG, Owen PJ, Shalom G, Stone K, Harrison M, Burgis TA, Lockyer M, Garcia-Lara J, Foster SJ , Pleasance SJ et al (2009) . BMC Genomics, 10, 291. RIS download Bibtex download
  • Chaudhuri RR, Peters SE, Pleasance SJ, Northen H, Willers C, Paterson GK, Cone DB, Allen AG, Owen PJ, Shalom G , Stekel DJ et al (2009) . PLoS Pathogens, 5(7). RIS download Bibtex download
  • Rasko DA, Rosovitz MJ, Myers GSA, Mongodin EF, Fricke WF, Gajer P, Crabtree J, Sebaihia M, Thomson NR, Chaudhuri R , Henderson IR et al (2008) . Journal of Bacteriology, 190(20), 6881-6893. RIS download Bibtex download
  • Chaudhuri RR & Pallen MJ (2006) . Nucleic Acids Res, 34(Database issue), D335-D337. RIS download Bibtex download
  • Riley M, Abe T, Arnaud MB, Berlyn MKB, Blattner FR, Chaudhuri RR, Glasner JD, Horiuchi T, Keseler IM, Kosuge T , Mori H et al (2006) . Nucleic Acids Research, 34(1), 1-9. RIS download Bibtex download

All publications

Journal articles

  • Buddle JE, Thompson LM, Williams AS, Wright RCT, Durham WM, Turner CE, Chaudhuri RR, Brockhurst MA & Fagan RP (2024) . PLOS Biology, 22(8). RIS download Bibtex download
  • Hall JN, Bah SY, Khalid H, Brailey A, Coleman S, Kirk T, Hussain N, Tovey M, Chaudhuri RR, Davies S , Tilley L et al (2024) . Microbial Genomics, 10(8). RIS download Bibtex download
  • Hassan MU, Chaudhuri RR & Williamson MP (2023) . Protein Science, 32(11). RIS download Bibtex download
  • Ormsby MJ, Vaz F, Kirk JA, Barwinska-Sendra A, Hallam JC, Lanzoni-Mangutchi P, Cole J, Chaudhuri RR, Salgado PS, Fagan RP & Douce GR (2023) . PLOS Pathogens, 19(6). RIS download Bibtex download
  • Bah S, Keeley A, Armitage E, Khalid H, Chaudhuri R, Senghore E, Manneh J, Tilley L, Marks M, Darboe S , Sesay A et al (2023) . mSphere, 8(1). RIS download Bibtex download
  • Qiu S, Bradley J, Zhang P, Chaudhuri R, Blaxter M, Butlin R & Scholes J (2022) . RIS download Bibtex download
  • Court EK, Chaudhuri RR, Kapoore RV, Villa RX, Pandhal J, Biggs CA & Stafford GP (2021) . Microbiology, 167(12). RIS download Bibtex download
  • Bossé JT, Li Y, Leanse LG, Zhou L, Chaudhuri RR, Peters SE, Wang J, Maglennon GA, Holden MTG, Maskell DJ , Tucker AW et al (2021) . Animal Diseases, 1(1). RIS download Bibtex download
  • Nlebedim VU, Chaudhuri RR & Walters K (2021) . Bioinformatics. RIS download Bibtex download
  • Gilroy R, Ravi A, Getino M, Pursley I, Horton DL, Alikhan NF, Baker D, Gharbi K, Hall N, Watson M , Adriaenssens EM et al (2021) . PeerJ, 9. RIS download Bibtex download
  • Janganan TK, Mullin N, Dafis-Sagarmendi A, Brunt J, Tzokov SB, Stringer S, Moir A, Chaudhuri RR, Fagan RP, Hobbs JK & Bullough PA (2020) . mSphere, 5(4). RIS download Bibtex download
  • Haldenby S, Bronowski C, Nelson C, Kenny J, Martinez-Rodriguez C, Chaudhuri R, Williams NJ, Forbes K, Strachan NJ, Pulman J , Winstanley IN et al (2020) . PLoS ONE, 15(1). RIS download Bibtex download
  • Bossé JT, Li Y, Fernandez Crespo R, Angen Ø, Holden MTG, Weinert LA, Maskell DJ, Tucker AW, Wren BW, Rycroft AN & Langford PR (2020) . Microbiology Resource Announcements, 9(1). RIS download Bibtex download
  • Weinert LA, Chaudhuri RR, Wang J, Peters SE, Corander J, Jombart T, Baig A, Howell KJ, Vehkala M, Välimäki N , Harris D et al (2019) . Nature Communications, 10(1). RIS download Bibtex download
  • Canals R, Chaudhuri RR, Steiner RE, Owen SV, Quinones-Olvera N, Gordon MA, Baym M, Ibba M & Hinton JCD (2019) . PLOS Pathogens, 15(9). RIS download Bibtex download
  • Gray K, Green LR, Chaudhuri RR & Shaw JG (2019) . Microbiology Resource Announcements, 8(30). RIS download Bibtex download
  • Pattrick CA, Webb JP, Green J, Chaudhuri RR, Collins MO & Kelly DJ (2019) . mSystems, 4(4). RIS download Bibtex download
  • de Lussy-Kubisa L, Chaudhuri R & Fagan R (2019) . Access Microbiology, 1(1A). RIS download Bibtex download
  • Canals R, Hammarlöf DL, Kröger C, Owen SV, Fong WY, Lacharme-Lora L, Zhu X, Wenner N, Carden SE, Honeycutt J , Monack DM et al (2019) . PLoS Biology, 17(1). RIS download Bibtex download
  • Vohra P, Chaudhuri RR, Mayho M, Vrettou C, Chintoan-Uta C, Thomson NR, Hope JC, Hopkins J & Stevens MP (2019) . BMC Genomics, 20. RIS download Bibtex download
  • Brockmeier SL, Loving CL, Nicholson TL, Wang J, Peters SE, Weinert L, Chaudhuri R, Seilly DJ, Langford PR, Rycroft A , Wren BW et al (2018) . Infection and Immunity, 86(3). RIS download Bibtex download
  • Howell KJ, Weinert LA, Peters SE, Wang J, Hernandez-Garcia J, Chaudhuri RR, Luan S-L, Angen Ø, Aragon V, Williamson SM , Langford PR et al (2017) . Journal of Clinical Microbiology, 55(9), 2617-2628. RIS download Bibtex download
  • Dunne KA, Chaudhuri RR, Rossiter AE, Beriotto I, Browning DF, Squire D, Cunningham AF, Cole JA, Loman N & Henderson IR (2017) . Microbial Genomics, 3. RIS download Bibtex download
  • Bossé JT, Li Y, Rogers J, Fernandez Crespo R, Li Y, Chaudhuri RR, Holden MTG, Maskell DJ, Tucker AW, Wren BW , Rycroft AN et al (2017) . Frontiers in Microbiology, 8. RIS download Bibtex download
  • Stafford GP, Chaudhuri RR, Haraszthy V, Friedrich V, Schäffer C, Ruscitto A, Honma K & Sharma A (2016) . Genome Announcements, 4(6). RIS download Bibtex download
  • Li Y, Bossé JT, Williamson SM, Maskell DJ, Tucker AW, Wren BW, Rycroft AN & Langford PR (2016) . Veterinary Record, 179, 276-276. RIS download Bibtex download
  • Bossé JT, Li Y, Crespo RF, Chaudhuri RR, Rogers J, Holden MTG, Maskell DJ, Tucker AW, Wren BW, Rycroft AN , Langford PR et al (2016) . Frontiers in Microbiology, 7:810. RIS download Bibtex download
  • Chen GE, Hitchcock A, Jackson PJ, Chaudhuri RR, Dickman MJ, Hunter CN & Canniffe DP (2016) . Journal of Bacteriology, 198(9), 1393-1400. RIS download Bibtex download
  • Wielgoss S, Didelot X, Chaudhuri RR, Liu X, Weedall GD, Velicer GJ & Vos M (2016) . The ISME Journal, 10, 2468-2477. RIS download Bibtex download
  • Grant AJ, Oshota O, Chaudhuri RR, Mayho M, Peters SE, Clare S, Maskell DJ & Mastroeni P (2016) . Infection and Immunity, 84(4), 989-997. RIS download Bibtex download
  • Bossé JT, Chaudhuri RR, Li Y, Leanse LG, Fernandez Crespo R, Coupland P, Holden MTG, Bazzolli DM, Maskell DJ, Tucker AW , Wren BW et al (2016) . Genome Announcements, 4(1), e01667-15-e01667-15. RIS download Bibtex download
  • García-Lara J, Weihs F, Ma X, Walker L, Chaudhuri RR, Kasturiarachchi J, Crossley H, Golestanian R & Foster SJ (2015) . Proceedings of the National Academy of Sciences, 112(51), 15725-15730. RIS download Bibtex download
  • Howell KJ, Peters SE, Wang J, Hernandez-Garcia J, Weinert LA, Luan S-L, Chaudhuri RR, Angen Ø, Aragon V, Williamson SM , Parkhill J et al (2015) . Journal of Clinical Microbiology, 53(12), 3812-3821. RIS download Bibtex download
  • Weinert LA, Chaudhuri RR, Wang J, Peters SE, Corander J, Jombart T, Baig A, Howell KJ, Vehkala M, Välimäki N , Harris D et al (2015) . Nature Communications, 6(1). RIS download Bibtex download
  • Bossé JT, Li Y, Atherton TG, Walker S, Williamson SM, Rogers J, Chaudhuri RR, Weinert LA, Holden MTG, Maskell DJ , Tucker AW et al (2015) . Veterinary Microbiology, 178(3-4), 279-282. RIS download Bibtex download
  • Weinert LA, Chaudhuri RR, Wang J, Peters SE, Corander J, Jombart T, Baig A, Howell KJ, Vehkala M, Välimäki N , Harris D et al (2015) . Nature Communications, 6(1). RIS download Bibtex download
  • Bossé JT, Li Y, Walker S, Atherton T, Fernandez Crespo R, Williamson SM, Rogers J, Chaudhuri RR, Weinert LA, Oshota O , Holden MTG et al (2015) . Journal of Antimicrobial Chemotherapy, 70(8), 2217-2222. RIS download Bibtex download
  • Smith G, Smith C, Kenny JG, Chaudhuri RR & Ritchie MG (2015) . Molecular Biology and Evolution, 32(4), 888-895. RIS download Bibtex download
  • Bossé JT, Li Y, Atherton TG, Walker S, Williamson SM, Rogers J, Chaudhuri RR, Weinert LA, Holden MTG, Maskell DJ , Tucker AW et al (2015) . Veterinary Microbiology, 179(3-4), 341-341. RIS download Bibtex download
  • Moura AE, Kenny JG, Chaudhuri RR, Hughes MA, Reisinger RR, de Bruyn PJN, Dahlheim ME, Hall N & Hoelzel AR (2015) . Heredity, 114(1), 48-55. RIS download Bibtex download
  • Howell KJ, Weinert LA, Chaudhuri RR, Luan S-L, Peters SE, Corander J, Harris D, Angen Ø, Aragon V, Bensaid A , Williamson SM et al (2014) . BMC Genomics, 15(1), 1179-1179. RIS download Bibtex download
  • Moura AE, Kenny JG, Chaudhuri R, Hughes MA, J. Welch A, Reisinger RR, de Bruyn PJN, Dahlheim ME, Hall N & Hoelzel AR (2014) . Molecular Ecology, 23(21), 5179-5192. RIS download Bibtex download
  • Bosse JT, Li Y, Angen O, Weinert LA, Chaudhuri RR, Holden MT, Williamson SM, Maskell DJ, Tucker AW, Wren BW , Rycroft AN et al (2014) . Journal of Clinical Microbiology, 52(7), 2380-2385. RIS download Bibtex download
  • Capeness MJ, Lambert C, Lovering AL, Till R, Uchida K, Chaudhuri R, Alderwick LJ, Lee DJ, Swarbreck D, Liddell S , Aizawa S-I et al (2013) . PLOS ONE, 8(11). RIS download Bibtex download
  • Luan S-L, Chaudhuri RR, Peters SE, Mayho M, Weinert LA, Crowther SA, Wang J, Langford PR, Rycroft A, Wren BW , Tucker AW et al (2013) . Vet Microbiol, 166(3-4), 558-566. RIS download Bibtex download
  • Howell KJ, Weinert LA, Luan S-L, Peters SE, Chaudhuri RR, Harris D, Angen O, Aragon V, Parkhill J, Langford PR , Rycroft AN et al (2013) . J Bacteriol, 195(18), 4264-4273. RIS download Bibtex download
  • Chaudhuri RR, Morgan E, Peters SE, Pleasance SJ, Hudson DL, Davies HM, Wang J, van Diemen PM, Buckley AM, Bowen AJ , Pullinger GD et al (2013) . PLoS Genet, 9(4), e1003456. RIS download Bibtex download
  • Dziva F, Hauser H, Connor TR, van Diemen PM, Prescott G, Langridge GC, Eckert S, Chaudhuri RR, Ewers C, Mellata M , Mukhopadhyay S et al (2013) . Infection and Immunity, 81(3), 838-849. RIS download Bibtex download
  • Maglennon GA, Cook BS, Deeney AS, Bossé JT, Peters SE, Langford PR, Maskell DJ, Tucker AW, Wren BW & Rycroft AN (2013) . Veterinary Research, 44(1), 124-124. RIS download Bibtex download
  • Maglennon GA, Cook BS, Matthews D, Deeney AS, Bossé JT, Langford PR, Maskell DJ, Tucker AW, Wren BW & Rycroft AN (2013) . Veterinary Research, 44(1), 63-63. RIS download Bibtex download
  • Chaudhuri RR & Henderson IR (2012) . Infect Genet Evol, 12(2), 214-226. RIS download Bibtex download
  • Chaudhuri RR, Yu L, Kanji A, Perkins TT, Gardner PP, Choudhary J, Maskell DJ & Grant AJ (2011) . Microbiology, 157(Pt 10), 2922-2932. RIS download Bibtex download
  • Clarke DJ, Chaudhuri RR, Martin HM, Campbell BJ, Rhodes JM, Constantinidou C, Pallen MJ, Loman NJ, Cunningham AF, Browning DF & Henderson IR (2011) . Journal of Bacteriology, 193(17), 4540-4540. RIS download Bibtex download
  • Eckert SE, Dziva F, Chaudhuri RR, Langridge GC, Turner DJ, Pickard DJ, Maskell DJ, Thomson NR & Stevens MP (2011) . Journal of Bacteriology, 193(7), 1771-1776. RIS download Bibtex download
  • Knowles TJ, Browning DF, Jeeves M, Maderbocus R, Rajesh S, Sridhar P, Manoli E, Emery D, Sommer U, Spencer A , Leyton DL et al (2011) . EMBO Rep, 12(2), 123-128. RIS download Bibtex download
  • Crossman LC, Chaudhuri RR, Beatson SA, Wells TJ, Desvaux M, Cunningham AF, Petty NK, Mahon V, Brinkley C, Hobman JL , Savarino SJ et al (2010) . J Bacteriol, 192(21), 5822-5831. RIS download Bibtex download
  • Chaudhuri RR, Sebaihia M, Hobman JL, Webber MA, Leyton DL, Goldberg MD, Cunningham AF, Scott-Tucker A, Ferguson PR, Thomas CM , Frankel G et al (2010) . PLoS One, 5(1), e8801. RIS download Bibtex download
  • Wang J, Chaudhuri RR & Ellar DJ (2010) . Plasmid, 63(1), 46-52. RIS download Bibtex download
  • Chaudhuri RR (2009) . Methods Mol Biol, 465, 419-431. RIS download Bibtex download
  • Chaudhuri RR, Allen AG, Owen PJ, Shalom G, Stone K, Harrison M, Burgis TA, Lockyer M, Garcia-Lara J, Foster SJ , Pleasance SJ et al (2009) . BMC Genomics, 10, 291. RIS download Bibtex download
  • Chaudhuri RR, Peters SE, Pleasance SJ, Northen H, Willers C, Paterson GK, Cone DB, Allen AG, Owen PJ, Shalom G , Stekel DJ et al (2009) . PLoS Pathogens, 5(7). RIS download Bibtex download
  • Rasko DA, Rosovitz MJ, Myers GSA, Mongodin EF, Fricke WF, Gajer P, Crabtree J, Sebaihia M, Thomson NR, Chaudhuri R , Henderson IR et al (2008) . Journal of Bacteriology, 190(20), 6881-6893. RIS download Bibtex download
  • Chaudhuri RR, Loman NJ, Snyder LAS, Bailey CM, Stekel DJ & Pallen MJ (2008) . Nucleic Acids Res, 36(Database issue), D543-D546. RIS download Bibtex download
  • Chaudhuri RR, Ren C-P, Desmond L, Vincent GA, Silman NJ, Brehm JK, Elmore MJ, Hudson MJ, Forsman M, Isherwood KE , Gurycová D et al (2007) . PLoS One, 2(4), e352. RIS download Bibtex download
  • Turner SM, Chaudhuri RR, Jiang Z-D, DuPont H, Gyles C, Penn CW, Pallen MJ & Henderson IR (2006) . J Clin Microbiol, 44(12), 4528-4536. RIS download Bibtex download
  • Nagy G, Danino V, Dobrindt U, Pallen M, Chaudhuri R, Emödy L, Hinton JC & Hacker J (2006) . Infection and Immunity, 74(10), 5914-5925. RIS download Bibtex download
  • Chaudhuri RR & Pallen MJ (2006) . Nucleic Acids Res, 34(Database issue), D335-D337. RIS download Bibtex download
  • Riley M, Abe T, Arnaud MB, Berlyn MKB, Blattner FR, Chaudhuri RR, Glasner JD, Horiuchi T, Keseler IM, Kosuge T , Mori H et al (2006) . Nucleic Acids Research, 34(1), 1-9. RIS download Bibtex download
  • Ou HY, Chen LL, Lonnen J, Chaudhuri RR, Thani AB, Smith R, Garton NJ, Hinton J, Pallen M, Barer MR & Rajakumar K (2006) . Nucleic Acids Research, 34(1). RIS download Bibtex download
  • Ideses D, Gophna U, Paitan Y, Chaudhuri RR, Pallen MJ & Ron EZ (2005) . Journal of Bacteriology, 187(23), 8164-8171. RIS download Bibtex download
  • Desvaux M, Khan A, Scott-Tucker A, Chaudhuri RR, Pallen MJ & Henderson IR (2005) . Biochim Biophys Acta, 1745(2), 223-253. RIS download Bibtex download
  • Parham NJ, Pollard SJ, Chaudhuri RR, Beatson SA, Desvaux M, Russell MA, Ruiz J, Fivian A, Vila J & Henderson IR (2005) . J Clin Microbiol, 43(5), 2425-2434. RIS download Bibtex download
  • Pallen MJ, Penn CW & Chaudhuri RR (2005) . Trends Microbiol, 13(4), 143-149. RIS download Bibtex download
  • Ou HY, Smith R, Lucchini S, Hinton J, Chaudhuri RR, Pallen M, Barer MR & Rajakumar K (2005) . NUCLEIC ACIDS RESEARCH, 33(1). RIS download Bibtex download
  • Zhang L, Chaudhuri RR, Constantinidou C, Hobman JL, Patel MD, Jones AC, Sarti D, Roe AJ, Vlisidou I, Shaw RK , Falciani F et al (2004) . Infect Immun, 72(12), 7282-7293. RIS download Bibtex download
  • Betts HJ, Chaudhuri RR & Pallen MJ (2004) . Trends Microbiol, 12(11), 476-482. RIS download Bibtex download
  • Ren C-P, Chaudhuri RR, Fivian A, Bailey CM, Antonio M, Barnes WM & Pallen MJ (2004) . J Bacteriol, 186(11), 3547-3560. RIS download Bibtex download
  • Chaudhuri RR, Khan AM & Pallen MJ (2004) coliBASE: An online database for Escherichia coli, Shigella and Salmonella comparative genomics. Nucleic Acids Research, 32(DATABASE ISS.). RIS download Bibtex download
  • Chaudhuri RR, Khan AM & Pallen MJ (2004) . Nucleic Acids Res, 32(Database issue), D296-D299. RIS download Bibtex download
  • Pallen MJ, Chaudhuri RR & Henderson IR (2003) . Curr Opin Microbiol, 6(5), 519-527. RIS download Bibtex download
  • Pallen M, Chaudhuri R & Khan A (2002) . Trends Microbiol, 10(12), 556-563. RIS download Bibtex download
  • Sharp PM, Bailes E, Chaudhuri RR, Rodenburg CM, Santiago MO & Hahn BH (2001) . Philosophical Transactions of the Royal Society B: Biological Sciences, 356(1410), 867-876. RIS download Bibtex download
  • Qiu S, Bradley JM, Zhang P, Chaudhuri R, Blaxter M, Butlin RK & Scholes JD () . New Phytologist. RIS download Bibtex download
  • Oshota O, Conway M, Fookes M, Schreiber F, Chaudhuri RR, Yu L, Morgan FJE, Clare S, Choudhary J, Thomson NR , Lio P et al () . PLOS ONE, 12(8), e0181365-e0181365. RIS download Bibtex download
  • Wilson R, Bourne C, Chaudhuri RR, Gregory R, Kenny J & Cossins A () . PLoS ONE, 9(6), e100572-e100572. RIS download Bibtex download
  • Christiansen MT, Kaas RS, Chaudhuri RR, Holmes MA, Hasman H & Aarestrup FM () . PLoS ONE, 9(2), e89018-e89018. RIS download Bibtex download
  • Canals R, Chaudhuri RR, Steiner RE, Owen SV, Quinones-Olvera N, Gordon MA, Ibba M & Hinton JCD () . RIS download Bibtex download
  • Baig A, Weinert LA, Peters SE, Howell KJ, Chaudhuri RR, Wang J, Holden MTG, Parkhill J, Langford PR, Rycroft AN , Wren BW et al () . Frontiers in Microbiology, 6. RIS download Bibtex download
  • Nlebedim VU, Chaudhuri RR & Walters K () . Bioinformatics. RIS download Bibtex download

Chapters

  • Bailes E, Chaudhuri RR, Santiago ML, Bibollet-Ruche F, Hahn BH & Sharp PM (2002) , The Molecular Epidemiology of Human Viruses (pp. 65-96). Springer US RIS download Bibtex download
  • Chaudhuri RR & Thomas GH () , Bacterial Pathogenomics (pp. 21-48). ASM Press RIS download Bibtex download

Preprints

  • Hall JN, Bah SY, Khalid H, Brailey A, Coleman S, Kirk T, Hussain N, Tovey M, Chaudhuri RR, Davies S , Tilley L et al (2024) , Cold Spring Harbor Laboratory. RIS download Bibtex download
  • Buddle JE, Wright RCT, Turner CE, Chaudhuri RR, Brockhurst MA & Fagan RP (2023) . RIS download Bibtex download
  • Ormsby MJ, Vaz F, Kirk JA, Barwinska-Sendra A, Hallam JC, Lanzoni-Mangutchi P, Cole J, Chaudhuri RR, Salgado PS, Fagan RP & Douce GR (2022) , Cold Spring Harbor Laboratory. RIS download Bibtex download
  • Bah SY, Keeley AJ, Armitage EP, Khalid H, Chaudhuri RR, Senghore E, Manneh J, Tilley L, Marks M, Darboe S , Sesay AK et al (2021) , Cold Spring Harbor Laboratory. RIS download Bibtex download
  • Gilroy R, Ravi A, Getino M, Pursley I, Horton D, Alikhan N-F, Baker D, Gharbi K, Hall N, Watson M , Adriaenssens EM et al (2020) , Research Square Platform LLC. RIS download Bibtex download
  • Gilroy R, Ravi A, Getino M, Pursley I, Horton D, Alikhan N-F, Baker D, Gharbi K, Hall N, Watson M , Adriaenssens EM et al (2020) , Research Square Platform LLC. RIS download Bibtex download
  • Gilroy R, Ravi A, Getino M, Pursley I, Horton D, Alikhan N-F, Baker D, Gharbi K, Hall N, Watson M , Adriaenssens EM et al (2020) , Research Square Platform LLC. RIS download Bibtex download
  • Janganan TK, Mullin N, Dafis-Sagarmendi A, Brunt J, Tzokov SB, Stringer S, Moir A, Chaudhuri R, Fagan RP, Hobbs JK & Bullough PA (2020) , Cold Spring Harbor Laboratory. RIS download Bibtex download
  • Bossé JT, Li Y, Leanse LG, Zhou L, Chaudhuri RR, Peters SE, Wang J, Maglennon GA, Holden MTG, Maskell DJ , Tucker AW et al (2018) , Cold Spring Harbor Laboratory. RIS download Bibtex download
  • Canals R, Hammarlöf DL, Kröger C, Owen SV, Fong WY, Lacharme-Lora L, Zhu X, Wenner N, Carden SE, Honeycutt J , Monack DM et al () , Cold Spring Harbor Laboratory. RIS download Bibtex download
Teaching activities

Module Coordinator: MBB344 Genomic Science

Level 3 Modules

MBB339 Evolutionary Genetics
MBB344 Genomic Science
MBB360 Project
MBB363 Genetics Data Handling

Level 2 Modules

MBB267 Genes, Genomes and Chromosomes

Level 1 Modules

MBB165 Practical Molecular Bioscience 1